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Caridea of the South Atlantic

There are 173 species of Caridea that are commonly found in the South Atlantic.

Information on the COI barcoding status of these species is presented in the table below.
MODE
A		 All available COI barcodes for this taxa group (collected from any ocean and/or without geo-referencing):
  • Of the 173 total species, 108 of these species (62%) have COI barcodes (from this or any ocean).
  • There are a total of 1484 "any ocean" COI barcode records available for this ocean and taxa group.
  • All available taxa group COI barcodes will be included in the Mode A downloads.
    • MODE
    B    		 Regional COI barcodes for this taxa group (includes only those collected in the South Atlantic region):
  • Of the 173 total species, 0 of these species (0%) have South Atlantic-collected COI barcodes.
  • There are a total of 1 "South Atlantic-collected" COI barcodes available for this taxa group.
  • In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
    • Uncoded
    Species    		 Of the 173 total species in this region, 65 species do not have any COI barcodes (from any region).

     Barcoding progress summary for the South Atlantic region, out of a total of 173 possible species:
    • There are COI barcodes for 108 species ( 62% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
      •
    • There are 12S barcodes for 32 species ( 18% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ). 
    • There are 16S barcodes for 103 species ( 59% coverage ), of which 1 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 18S barcodes for 60 species ( 34% coverage ), of which 1 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 28S barcodes for 29 species ( 16% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
    Change Region   [ World ] [ Arctic ] [ North Atlantic ] [ South Atlantic ] [ Southern Ocean ] [ Indian Ocean ] [ South Pacific ]
    [ North Pacific ] [ Baltic Sea ] [ Mediterranean Sea ] [ Australia subregion ]
    -----> Click here to go back to the Group Summary page. <-----


    Caridea of the South Atlantic
    MZGdb DATA FILES

    Database-Version:   v2023-m07-15    		 --->   Mode-A   <---

    COI barcodes = 1484
    12S barcodes = 76
    16S barcodes = 646
    18S barcodes = 149
    28S barcodes = 83
    		 Mode-B

    COI barcodes = 1
    12S barcodes = 0
    16S barcodes = 7
    18S barcodes = 2
    28S barcodes = 0
    		 Mode-C

    COI records = 2614
    12S records = 118
    16S records = 1324
    18S records = 299
    28S records = 165
    		 Mode-D

    COI records = 13
    12S records = 0
    16S records = 8
    18S records = 2
    28S records = 0
    FASTA file MZGdb fasta (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb fasta (mode-B)
    COI | n/d | 16S | 18S | n/d

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb fasta (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb fasta (mode-D)
    COI | n/d | 16S | 18S | n/d

    Genus-spp and species data
    from specific ocean     (mode-D)
    Mothur-formatted
    Taxonomic Hierarchy file

    (paired with FASTA file above)    		 MZGdb Mothur (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb Mothur (mode-B)
    COI | n/d | 16S | 18S | n/d

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb Mothur (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb Mothur (mode-D)
    COI | n/d | 16S | 18S | n/d

    Genus-spp and species data
    from specific ocean     (mode-D)
    MZGdb v3.0

    "full format"

    go to
    Format Description    		CSV

    Excel-friendly full format
    comma-separated-values    		 MZGdb CSV (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb CSV (mode-B)
    COI | n/d | 16S | 18S | n/d

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb CSV (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb CSV (mode-D)
    COI | n/d | 16S | 18S | n/d

    Genus-spp and species data
    from specific ocean     (mode-D)
    PSV

    pipe-separated-values    		 MZGdb PSV (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb PSV (mode-B)
    COI | n/d | 16S | 18S | n/d

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb PSV (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb PSV (mode-D)
    COI | n/d | 16S | 18S | n/d

    Genus-spp and species data
    from specific ocean     (mode-D)


    MZGdb Atlas [ database-version = v2023-m07-15 ];   html-date = 2023-Jul-21









    Fri Jul 21 08:09:09 EDT 2023